Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03912 | Not Available | Positive | 4354848 - 4356017 | 43004.4 |
| hypothetical protein | BACPLE_03913 | Not Available | Negative | 4356206 - 4356463 | 9309.24 |
| cobq/cobb/mind/para nucleotide binding domain protein | BACPLE_03914 | Not Available | Negative | 4356468 - 4357226 | 27555.5 |
| hypothetical protein | BACPLE_03915 | Not Available | Positive | 4357513 - 4357842 | 12743.1 |
| toxin-antitoxin system, toxin component, fic family | BACPLE_03916 | Not Available | Positive | 4357846 - 4358682 | 32322.8 |
| hypothetical protein | BACPLE_03917 | Not Available | Positive | 4358696 - 4358821 | 4675.79 |
| resolvase, n-terminal domain protein | BACPLE_03918 | Not Available | Positive | 4358924 - 4359562 | 23937.1 |
| hypothetical protein | BACPLE_03919 | Not Available | Positive | 4359605 - 4359820 | 7852.07 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_03920 | Not Available | Negative | 4359801 - 4360313 | 18774.4 |
| radical sam domain protein | BACPLE_03921 | Not Available | Negative | 4360329 - 4361204 | 34028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

