Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| istb-like atp-binding protein | BACPLE_03902 | Not Available | Positive | 4344500 - 4345288 | 29777.1 |
| hipa-like n-terminal domain protein | BACPLE_03903 | Not Available | Negative | 4345356 - 4346912 | 59199.6 |
| toxin-antitoxin system, antitoxin component, xre family | BACPLE_03904 | Not Available | Negative | 4346902 - 4347222 | 12315.2 |
| hipa-like c-terminal domain protein | BACPLE_03905 | Not Available | Negative | 4347322 - 4348911 | 60669.4 |
| dna-binding helix-turn-helix protein | BACPLE_03906 | Not Available | Negative | 4348904 - 4349254 | 13369.6 |
| hypothetical protein | BACPLE_03907 | Not Available | Positive | 4349670 - 4350950 | 49138.9 |
| hypothetical protein | BACPLE_03908 | Not Available | Positive | 4350966 - 4351127 | 6315.54 |
| transcriptional regulator, luxr family | BACPLE_03909 | Not Available | Negative | 4351256 - 4352314 | 40748.3 |
| hypothetical protein | BACPLE_03910 | Not Available | Positive | 4352617 - 4353849 | 47142.0 |
| hypothetical protein | BACPLE_03911 | Not Available | Positive | 4353846 - 4354766 | 34044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

