Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| b3/4 domain protein | BACPLE_00355 | Not Available | Negative | 408072 - 408740 | 24861.5 |
| conserved hypothetical protein, yfih family | BACPLE_00356 | Not Available | Negative | 408763 - 409353 | 22144.8 |
| obg family gtpase cgta | BACPLE_00357 | Not Available | Negative | 409563 - 410747 | 44323.5 |
| adenylate kinase | BACPLE_00358 | Not Available | Negative | 410803 - 411372 | 20777.1 |
| hypoxanthine phosphoribosyltransferase | BACPLE_00359 | Not Available | Negative | 411397 - 411990 | 22271.2 |
| yjef domain protein | BACPLE_00360 | Not Available | Positive | 412091 - 413608 | 54752.8 |
| hypothetical protein | BACPLE_00361 | Not Available | Positive | 413605 - 414657 | 38921.5 |
| hypothetical protein | BACPLE_00362 | Not Available | Negative | 414908 - 417184 | 84614.2 |
| hypothetical protein | BACPLE_00363 | Not Available | Negative | 417324 - 418211 | 32382.6 |
| hypothetical protein | BACPLE_00364 | Not Available | Negative | 418225 - 420189 | 71091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

