Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, major facilitator family protein | BACPLE_03872 | Not Available | Positive | 4312134 - 4313294 | 41908.0 |
| kinase, pfkb family | BACPLE_03873 | Not Available | Positive | 4313299 - 4314180 | 32045.5 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_03874 | Not Available | Positive | 4314217 - 4317282 | 116353.0 |
| hypothetical protein | BACPLE_03875 | Not Available | Positive | 4317347 - 4318015 | 25115.3 |
| peptidase, m23 family | BACPLE_03876 | Not Available | Positive | 4318312 - 4319220 | 33930.1 |
| hypothetical protein | BACPLE_03877 | Not Available | Positive | 4319366 - 4319908 | 20812.3 |
| doxx family protein | BACPLE_03878 | Not Available | Positive | 4319898 - 4321214 | 50417.5 |
| triose-phosphate isomerase | BACPLE_03879 | Not Available | Positive | 4321239 - 4321994 | 26865.1 |
| sporulation and cell division repeat protein | BACPLE_03880 | Not Available | Positive | 4322117 - 4322578 | 17274.0 |
| gtp cyclohydrolase i | BACPLE_03881 | Not Available | Positive | 4322578 - 4323174 | 22824.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

