Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase, short chain dehydrogenase/reductase family protein | BACPLE_03862 | Not Available | Positive | 4294742 - 4295587 | 31377.4 |
| diaminopimelate dehydrogenase | BACPLE_03863 | Not Available | Negative | 4295656 - 4296555 | 32224.9 |
| holliday junction dna helicase ruva | BACPLE_03864 | Not Available | Positive | 4296727 - 4297323 | 21320.2 |
| prolipoprotein diacylglyceryl transferase | BACPLE_03865 | Not Available | Positive | 4297553 - 4298380 | 31541.0 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03866 | Not Available | Positive | 4298575 - 4301697 | 114285.0 |
| susd family protein | BACPLE_03867 | Not Available | Positive | 4301675 - 4303453 | 68573.0 |
| glycosyl hydrolase family 32 | BACPLE_03868 | Not Available | Positive | 4303539 - 4305344 | 67956.7 |
| hypothetical protein | BACPLE_03869 | Not Available | Positive | 4305511 - 4307859 | 88115.8 |
| glycosyl hydrolase family 32 | BACPLE_03870 | Not Available | Positive | 4307903 - 4309858 | 73641.5 |
| alpha-galactosidase | BACPLE_03871 | Not Available | Positive | 4309882 - 4312074 | 83158.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

