Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter, permease protein | BACPLE_03852 | Not Available | Positive | 4278497 - 4280863 | 88945.6 |
| superoxide dismutase, mn/fe family | BACPLE_03853 | Not Available | Negative | 4280936 - 4281508 | 21893.1 |
| glutamine-fructose-6-phosphate transaminase (isomerizing) | BACPLE_03854 | Not Available | Positive | 4281718 - 4283562 | 66772.7 |
| rna polymerase sigma-70 factor | BACPLE_03855 | Not Available | Positive | 4283913 - 4284479 | 22453.8 |
| sigma factor regulatory protein, fecr/pupr family | BACPLE_03856 | Not Available | Positive | 4284569 - 4285573 | 38441.8 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03857 | Not Available | Positive | 4285736 - 4289089 | 124999.0 |
| susd family protein | BACPLE_03858 | Not Available | Positive | 4289141 - 4290988 | 70114.3 |
| hypothetical protein | BACPLE_03859 | Not Available | Positive | 4291094 - 4292449 | 50208.6 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase | BACPLE_03860 | Not Available | Positive | 4292582 - 4293502 | 35054.3 |
| oxidoreductase, fad/fmn-binding protein | BACPLE_03861 | Not Available | Positive | 4293652 - 4294740 | 40475.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

