Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f5/8 type c domain protein | BACPLE_03841 | Not Available | Positive | 4265472 - 4266830 | 50105.6 |
| hypothetical protein | BACPLE_03842 | Not Available | Positive | 4266916 - 4267605 | 25639.2 |
| membrane protein, marc family | BACPLE_03844 | Not Available | Positive | 4268651 - 4269223 | 21184.0 |
| hypothetical protein | BACPLE_03845 | Not Available | Positive | 4269391 - 4269837 | 17107.8 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_03846 | Not Available | Negative | 4269912 - 4271216 | 48938.5 |
| sigma-54 interaction domain protein | BACPLE_03847 | Not Available | Negative | 4271206 - 4272579 | 51660.9 |
| outer membrane efflux protein | BACPLE_03848 | Not Available | Positive | 4272648 - 4274162 | 57868.2 |
| efflux transporter, rnd family, mfp subunit | BACPLE_03849 | Not Available | Positive | 4274188 - 4275438 | 48013.6 |
| hypothetical protein | BACPLE_03850 | Not Available | Positive | 4275452 - 4276078 | 22250.7 |
| efflux abc transporter, permease protein | BACPLE_03851 | Not Available | Positive | 4276114 - 4278474 | 88978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

