Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03831 | Not Available | Positive | 4251247 - 4252086 | 31161.6 |
| feruloyl esterase | BACPLE_03832 | Not Available | Positive | 4252204 - 4253085 | 33001.8 |
| hypothetical protein | BACPLE_03833 | Not Available | Negative | 4253178 - 4254746 | 59826.3 |
| auxiliary transport protein, membrane fusion protein (mfp) family protein | BACPLE_03834 | Not Available | Negative | 4254748 - 4255785 | 38792.4 |
| outer membrane efflux protein | BACPLE_03835 | Not Available | Negative | 4255830 - 4257137 | 49393.4 |
| transcriptional regulator, arac family | BACPLE_03836 | Not Available | Positive | 4257303 - 4258205 | 34294.3 |
| hypothetical protein | BACPLE_03837 | Not Available | Positive | 4258962 - 4259852 | 34414.3 |
| hypothetical protein | BACPLE_03839 | Not Available | Negative | 4260033 - 4260209 | 6589.99 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03838 | Not Available | Positive | 4260169 - 4263411 | 121610.0 |
| susd family protein | BACPLE_03840 | Not Available | Positive | 4263430 - 4265460 | 77177.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

