Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase family 8, super-sandwich domain protein | BACPLE_03801 | Not Available | Positive | 4218591 - 4221665 | 116151.0 |
| nad(+)/nadh kinase | BACPLE_03802 | Not Available | Negative | 4221748 - 4222632 | 33278.1 |
| pyridoxine 5'-phosphate synthase | BACPLE_03803 | Not Available | Positive | 4222741 - 4223454 | 26477.6 |
| transporter, mota/tolq/exbb proton channel family protein | BACPLE_03804 | Not Available | Positive | 4223458 - 4224177 | 25859.0 |
| transport energizing protein, exbd/tolr family | BACPLE_03805 | Not Available | Positive | 4224235 - 4224600 | 13789.8 |
| tonb family domain protein | BACPLE_03806 | Not Available | Positive | 4224615 - 4225451 | 29231.9 |
| dj-1 family protein | BACPLE_03807 | Not Available | Positive | 4225478 - 4226026 | 19270.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | BACPLE_03808 | Not Available | Positive | 4226026 - 4226694 | 24412.4 |
| atp-dependent dna helicase recg | BACPLE_03809 | Not Available | Positive | 4226694 - 4228793 | 80576.0 |
| glycosyl hydrolase family 35 | BACPLE_03810 | Not Available | Positive | 4229131 - 4231437 | 86853.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

