Phocaeicola plebeius DSM 17135

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola plebeius DSM 17135 is a Gram-negative, non-sporulating rod-shaped bacterium classified within the intestinal microflora of animals. This organism is a chemoheterotroph, deriving its energy from organic compounds, and operates as an anaerobe, thriving in oxygen-depleted environments typical of the gastrointestinal tract. As a member of the animal intestinal microbiota, Phocaeicola plebeius may play a significant role in the digestive processes and overall health of its host. Its absence or imbalance could potentially disrupt normal gut function, highlighting its importance in maintaining the homeostasis of the intestinal ecosystem. Furthermore, the specific adaptation to an anaerobic lifestyle suggests that Phocaeicola plebeius may be involved in the fermentation processes, contributing to the breakdown of complex carbohydrates and the production of short-chain fatty acids, which are beneficial for host metabolism. Overall, the traits of Phocaeicola plebeius underline its specialized ecological niche and suggest potential implications for gut health and microbial interactions within the animal intestinal environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola plebeius
StrainDSM 17135

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola plebeius DSM 17135
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola plebeius DSM 17135 B_plebeius-2.0.1_Cont2727, whole

Gene Summary

Adenine Count

1232116 bp

Thymine Count

1229996 bp

Guanine Count

991003 bp

Cytosine Count

968209 bp

Genome Length

4421324 bp

Protein-coding Genes

3919 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide lyase family 8, super-sandwich domain proteinBACPLE_03801Not AvailablePositive4218591 - 4221665116151.0
nad(+)/nadh kinaseBACPLE_03802Not AvailableNegative4221748 - 422263233278.1
pyridoxine 5'-phosphate synthaseBACPLE_03803Not AvailablePositive4222741 - 422345426477.6
transporter, mota/tolq/exbb proton channel family proteinBACPLE_03804Not AvailablePositive4223458 - 422417725859.0
transport energizing protein, exbd/tolr familyBACPLE_03805Not AvailablePositive4224235 - 422460013789.8
tonb family domain proteinBACPLE_03806Not AvailablePositive4224615 - 422545129231.9
dj-1 family proteinBACPLE_03807Not AvailablePositive4225478 - 422602619270.9
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseBACPLE_03808Not AvailablePositive4226026 - 422669424412.4
atp-dependent dna helicase recgBACPLE_03809Not AvailablePositive4226694 - 422879380576.0
glycosyl hydrolase family 35BACPLE_03810Not AvailablePositive4229131 - 423143786853.5

Displaying genes 3801 – 3810 of 4023 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.