Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BACPLE_00345 | Not Available | Negative | 397059 - 399692 | 98478.9 |
| putative mannose-6-phosphate isomerase, class i | BACPLE_00346 | Not Available | Positive | 399955 - 400926 | 36771.4 |
| transcriptional regulator, arac family | BACPLE_00347 | Not Available | Negative | 400993 - 401799 | 30656.8 |
| outer membrane efflux protein | BACPLE_00348 | Not Available | Positive | 401890 - 403230 | 50977.2 |
| auxiliary transport protein, membrane fusion protein (mfp) family protein | BACPLE_00349 | Not Available | Positive | 403235 - 404299 | 40414.3 |
| hypothetical protein | BACPLE_00350 | Not Available | Positive | 404308 - 405900 | 61311.1 |
| hypothetical protein | BACPLE_00351 | Not Available | Negative | 405897 - 406535 | 22868.5 |
| hypothetical protein | BACPLE_00352 | Not Available | Negative | 406661 - 407191 | 19457.9 |
| hypothetical protein | BACPLE_00353 | Not Available | Negative | 407252 - 407446 | 7248.88 |
| peptidase, m23 family | BACPLE_00354 | Not Available | Negative | 407453 - 408070 | 22356.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

