Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase, class iii | BACPLE_03781 | Not Available | Negative | 4191734 - 4192858 | 41019.6 |
| n-acetyl-gamma-glutamyl-phosphate reductase | BACPLE_03782 | Not Available | Negative | 4192946 - 4193914 | 35932.2 |
| putative argininosuccinate synthase | BACPLE_03783 | Not Available | Negative | 4193911 - 4195119 | 44976.6 |
| hypothetical protein | BACPLE_03784 | Not Available | Negative | 4195197 - 4195766 | 21140.5 |
| arginine repressor, c-terminal domain protein | BACPLE_03785 | Not Available | Negative | 4195783 - 4196265 | 18098.9 |
| methyltransferase domain protein | BACPLE_03786 | Not Available | Positive | 4196438 - 4197163 | 27301.7 |
| pepsy domain protein | BACPLE_03787 | Not Available | Negative | 4197153 - 4198277 | 42158.4 |
| hypothetical protein | BACPLE_03788 | Not Available | Negative | 4198287 - 4199708 | 51636.1 |
| tonb-dependent receptor plug domain protein | BACPLE_03789 | Not Available | Negative | 4199738 - 4202161 | 91152.9 |
| cof-like hydrolase | BACPLE_03790 | Not Available | Negative | 4202341 - 4203123 | 29539.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

