Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03771 | Not Available | Positive | 4176530 - 4176655 | 4643.86 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03772 | Not Available | Positive | 4176755 - 4180018 | 119398.0 |
| susd family protein | BACPLE_03773 | Not Available | Positive | 4180039 - 4181793 | 66502.5 |
| hypothetical protein | BACPLE_03774 | Not Available | Positive | 4181802 - 4183151 | 50158.5 |
| hypothetical protein | BACPLE_03775 | Not Available | Positive | 4183171 - 4185147 | 69800.7 |
| glycosyl hydrolase family 26 | BACPLE_03776 | Not Available | Positive | 4185158 - 4186558 | 52277.3 |
| glycosyl hydrolase family 26 | BACPLE_03777 | Not Available | Positive | 4186725 - 4187825 | 41660.0 |
| hypothetical protein | BACPLE_03778 | Not Available | Positive | 4187842 - 4189014 | 43953.2 |
| transporter, major facilitator family protein | BACPLE_03779 | Not Available | Positive | 4189034 - 4190428 | 52058.4 |
| n-acylglucosamine 2-epimerase | BACPLE_03780 | Not Available | Positive | 4190418 - 4191614 | 46648.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

