Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | BACPLE_03761 | Not Available | Negative | 4160428 - 4162071 | 62045.3 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03762 | Not Available | Negative | 4162096 - 4165086 | 109393.0 |
| hypothetical protein | BACPLE_03763 | Not Available | Negative | 4165117 - 4166133 | 37966.9 |
| alpha-n-acetylglucosaminidase (naglu) | BACPLE_03764 | Not Available | Negative | 4166213 - 4168381 | 83656.5 |
| mate efflux family protein | BACPLE_03765 | Not Available | Positive | 4168559 - 4169908 | 49156.9 |
| hypothetical protein | BACPLE_03766 | Not Available | Negative | 4169912 - 4170139 | 8233.75 |
| pyrroline-5-carboxylate reductase | BACPLE_03767 | Not Available | Negative | 4170195 - 4170968 | 27168.9 |
| hypothetical protein | BACPLE_03768 | Not Available | Positive | 4171428 - 4172852 | 53353.9 |
| alpha-galactosidase | BACPLE_03769 | Not Available | Negative | 4172935 - 4175142 | 83484.0 |
| transcriptional regulator, arac family | BACPLE_03770 | Not Available | Positive | 4175209 - 4176225 | 39672.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

