Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain protein | BACPLE_03751 | Not Available | Negative | 4146897 - 4147424 | 19753.6 |
| ispg5, transposase orf1 | BACPLE_03752 | Not Available | Negative | 4147802 - 4148158 | 14000.8 |
| ribosomal protein l31 | BACPLE_03753 | Not Available | Negative | 4148332 - 4148586 | 9609.51 |
| fructose-1,6-bisphosphate aldolase, class ii | BACPLE_03754 | Not Available | Positive | 4148933 - 4149940 | 36656.9 |
| hypothetical protein | BACPLE_03755 | Not Available | Negative | 4150021 - 4150197 | 6910.36 |
| hypothetical protein | BACPLE_03756 | Not Available | Positive | 4150307 - 4151014 | 27185.3 |
| protein araj | BACPLE_03757 | Not Available | Positive | 4151103 - 4152284 | 42598.6 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_03758 | Not Available | Positive | 4152294 - 4156427 | 156986.0 |
| polygalacturonase (pectinase) | BACPLE_03759 | Not Available | Negative | 4156519 - 4157919 | 51505.2 |
| putative alpha-1,2-mannosidase | BACPLE_03760 | Not Available | Negative | 4157944 - 4160271 | 88544.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

