Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pasta domain protein | BACPLE_03721 | Not Available | Negative | 4114636 - 4115286 | 24057.1 |
| hypothetical protein | BACPLE_03723 | Not Available | Negative | 4115593 - 4115715 | 4452.66 |
| hypothetical protein | BACPLE_03722 | Not Available | Positive | 4115691 - 4116890 | 44744.0 |
| hypothetical protein | BACPLE_03724 | Not Available | Positive | 4116875 - 4117024 | 6114.58 |
| putative bacteriocin export abc transporter, lactococcin 972 group | BACPLE_03725 | Not Available | Positive | 4117077 - 4117754 | 25054.3 |
| efflux abc transporter, permease protein | BACPLE_03726 | Not Available | Positive | 4117767 - 4120142 | 89337.3 |
| hypothetical protein | BACPLE_03727 | Not Available | Positive | 4120147 - 4121082 | 33470.6 |
| hypothetical protein | BACPLE_03728 | Not Available | Negative | 4121094 - 4121222 | 4816.79 |
| hypothetical protein | BACPLE_03729 | Not Available | Negative | 4121391 - 4122308 | 33788.1 |
| k+-dependent na+/ca+ exchanger family protein | BACPLE_03730 | Not Available | Negative | 4122333 - 4123298 | 33597.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

