Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03691 | Not Available | Negative | 4072273 - 4075401 | 116419.0 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_03692 | Not Available | Negative | 4075555 - 4079577 | 153912.0 |
| hypothetical protein | BACPLE_03693 | Not Available | Positive | 4079621 - 4079878 | 10204.8 |
| alpha-l-fucosidase | BACPLE_03694 | Not Available | Positive | 4079871 - 4081211 | 52111.9 |
| glycosyl hydrolase, family 88 | BACPLE_03695 | Not Available | Positive | 4081229 - 4082341 | 42939.6 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_03696 | Not Available | Positive | 4082338 - 4084449 | 80746.9 |
| alpha-1,3-galactosidase b | BACPLE_03697 | Not Available | Negative | 4084488 - 4086266 | 66839.9 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03698 | Not Available | Positive | 4086709 - 4089645 | 107782.0 |
| susd family protein | BACPLE_03699 | Not Available | Positive | 4089673 - 4091472 | 68414.9 |
| f5/8 type c domain protein | BACPLE_03700 | Not Available | Positive | 4091578 - 4092417 | 30755.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

