Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00335 | Not Available | Negative | 382089 - 383240 | 43621.7 |
| glycosyl hydrolase, family 43 | BACPLE_00336 | Not Available | Negative | 383281 - 384273 | 37562.0 |
| glycosyl hydrolase, family 88 | BACPLE_00337 | Not Available | Negative | 384403 - 386712 | 89195.8 |
| hypothetical protein | BACPLE_00338 | Not Available | Negative | 386728 - 388005 | 48613.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BACPLE_00339 | Not Available | Negative | 388241 - 389533 | 47205.4 |
| tryptophan--trna ligase | BACPLE_00340 | Not Available | Negative | 389538 - 390632 | 41335.7 |
| carbamoyl-phosphate synthase, large subunit | BACPLE_00341 | Not Available | Positive | 390872 - 394096 | 120089.0 |
| redoxin family protein | BACPLE_00343 | Not Available | Negative | 394262 - 394903 | 24258.8 |
| hypothetical protein | BACPLE_00342 | Not Available | Positive | 394894 - 395652 | 29543.7 |
| hypothetical protein | BACPLE_00344 | Not Available | Negative | 395718 - 397001 | 45431.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

