Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system h protein | BACPLE_03681 | Not Available | Negative | 4060548 - 4060928 | 14157.5 |
| hypothetical protein | BACPLE_03682 | Not Available | Negative | 4060963 - 4061643 | 25790.7 |
| rna polymerase sigma-54 factor | BACPLE_03683 | Not Available | Negative | 4061653 - 4063134 | 56349.3 |
| phosphoribulokinase/uridine kinase family protein | BACPLE_03684 | Not Available | Negative | 4063209 - 4064873 | 64108.7 |
| na/pi-cotransporter ii-like protein | BACPLE_03685 | Not Available | Positive | 4064964 - 4066658 | 63222.3 |
| metalloenzyme superfamily | BACPLE_03686 | Not Available | Negative | 4066744 - 4067658 | 34227.6 |
| arylsulfatase | BACPLE_03687 | Not Available | Negative | 4067667 - 4068920 | 48396.5 |
| hypothetical protein | BACPLE_03688 | Not Available | Positive | 4068924 - 4069244 | 11539.0 |
| hypothetical protein | BACPLE_03689 | Not Available | Negative | 4069304 - 4070533 | 46078.1 |
| susd family protein | BACPLE_03690 | Not Available | Negative | 4070624 - 4072240 | 61902.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

