Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 88 | BACPLE_03671 | Not Available | Positive | 4036134 - 4037261 | 43509.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_03672 | Not Available | Positive | 4037266 - 4040295 | 115080.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_03673 | Not Available | Positive | 4040330 - 4043545 | 122962.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_03674 | Not Available | Positive | 4043647 - 4046307 | 100956.0 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03675 | Not Available | Positive | 4046730 - 4049903 | 120035.0 |
| susd family protein | BACPLE_03676 | Not Available | Positive | 4049916 - 4051832 | 73615.3 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_03677 | Not Available | Positive | 4051981 - 4055136 | 119156.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_03678 | Not Available | Positive | 4055335 - 4057968 | 99563.6 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BACPLE_03679 | Not Available | Negative | 4058174 - 4060015 | 68356.0 |
| phosphoribosylaminoimidazole carboxylase, catalytic subunit | BACPLE_03680 | Not Available | Negative | 4060020 - 4060529 | 17705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

