Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 | BACPLE_03651 | Not Available | Positive | 4010702 - 4011145 | 15713.3 |
| ribosomal protein l1 | BACPLE_03652 | Not Available | Positive | 4011162 - 4011860 | 24993.7 |
| ribosomal protein l10 | BACPLE_03653 | Not Available | Positive | 4011877 - 4012392 | 18438.4 |
| ribosomal protein l7/l12 | BACPLE_03654 | Not Available | Positive | 4012472 - 4012849 | 12707.2 |
| dna-directed rna polymerase, beta subunit | BACPLE_03655 | Not Available | Positive | 4013008 - 4016820 | 142474.0 |
| dna-directed rna polymerase, beta' subunit | BACPLE_03656 | Not Available | Positive | 4016897 - 4021183 | 158891.0 |
| hypothetical protein | BACPLE_03657 | Not Available | Negative | 4021375 - 4021794 | 15887.2 |
| cora-like protein | BACPLE_03658 | Not Available | Negative | 4021806 - 4022753 | 36457.2 |
| Trna-asn | Not Available | Not Available | Positive | 4022915 - 4022988 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 4023015 - 4023088 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

