Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03611 | Not Available | Positive | 3966547 - 3968118 | 58265.1 |
| leucine rich repeat protein | BACPLE_03612 | Not Available | Positive | 3968120 - 3970720 | 96387.6 |
| class ii mhc-associated invariant chain trimerisation domain protein | BACPLE_03613 | Not Available | Positive | 3970736 - 3972661 | 71978.1 |
| peptidase, s8/s53 family | BACPLE_03614 | Not Available | Positive | 3972781 - 3974820 | 72148.3 |
| hypothetical protein | BACPLE_03615 | Not Available | Positive | 3974841 - 3975635 | 29196.9 |
| hypothetical protein | BACPLE_03616 | Not Available | Positive | 3975658 - 3976128 | 18115.3 |
| hypothetical protein | BACPLE_03617 | Not Available | Positive | 3976157 - 3976312 | 5968.52 |
| transposase, is4 family | BACPLE_03618 | Not Available | Negative | 3976473 - 3977780 | 50486.2 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03619 | Not Available | Positive | 3978187 - 3981132 | 109366.0 |
| susd family protein | BACPLE_03620 | Not Available | Positive | 3981157 - 3982707 | 58002.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

