Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate dehydratase, type ii | BACPLE_03601 | Not Available | Positive | 3954561 - 3954992 | 16083.2 |
| pyruvate kinase | BACPLE_03602 | Not Available | Positive | 3955003 - 3956463 | 54092.3 |
| o-methyltransferase | BACPLE_03603 | Not Available | Positive | 3956466 - 3957104 | 24588.6 |
| ribosome-binding factor a | BACPLE_03604 | Not Available | Positive | 3957114 - 3957449 | 12988.0 |
| efflux abc transporter, permease protein | BACPLE_03605 | Not Available | Positive | 3957616 - 3958779 | 43009.7 |
| hypothetical protein | BACPLE_03606 | Not Available | Negative | 3958803 - 3959039 | 8652.26 |
| endonuclease/exonuclease/phosphatase family protein | BACPLE_03607 | Not Available | Negative | 3959625 - 3960656 | 39217.4 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03608 | Not Available | Positive | 3961139 - 3964072 | 108887.0 |
| susd family protein | BACPLE_03609 | Not Available | Positive | 3964088 - 3965602 | 57945.8 |
| hypothetical protein | BACPLE_03610 | Not Available | Positive | 3965625 - 3966521 | 33431.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

