Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00325 | Not Available | Negative | 365259 - 366095 | 31999.7 |
| endonuclease/exonuclease/phosphatase family protein | BACPLE_00326 | Not Available | Positive | 366262 - 367131 | 32836.8 |
| abc transporter, atp-binding protein | BACPLE_00327 | Not Available | Negative | 367201 - 367851 | 23623.7 |
| thif family protein | BACPLE_00328 | Not Available | Negative | 367858 - 368583 | 26869.8 |
| universal stress family protein | BACPLE_00329 | Not Available | Negative | 368580 - 370724 | 80544.6 |
| aspartate-semialdehyde dehydrogenase | BACPLE_00330 | Not Available | Positive | 370923 - 371933 | 37199.6 |
| hypothetical protein | BACPLE_00331 | Not Available | Positive | 372156 - 372329 | 7145.69 |
| susd family protein | BACPLE_00332 | Not Available | Negative | 372322 - 374349 | 76989.5 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00333 | Not Available | Negative | 374366 - 377668 | 123110.0 |
| response regulator receiver domain protein | BACPLE_00334 | Not Available | Positive | 378080 - 382018 | 148683.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

