Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03581 | Not Available | Negative | 3933737 - 3933958 | 9023.77 |
| hypothetical protein | BACPLE_03582 | Not Available | Positive | 3933992 - 3934474 | 18592.8 |
| hypothetical protein | BACPLE_03583 | Not Available | Negative | 3934347 - 3934757 | 14889.3 |
| tigr00730 family protein | BACPLE_03584 | Not Available | Positive | 3935279 - 3935812 | 19927.2 |
| sis domain protein | BACPLE_03585 | Not Available | Positive | 3935836 - 3936438 | 21494.1 |
| glycosyl hydrolase, family 88 | BACPLE_03586 | Not Available | Negative | 3936518 - 3937648 | 43443.8 |
| hypothetical protein | BACPLE_03587 | Not Available | Positive | 3937715 - 3937867 | 5921.49 |
| polygalacturonase (pectinase) | BACPLE_03588 | Not Available | Positive | 3937935 - 3939221 | 48546.1 |
| putative nucleoside diphosphate kinase | BACPLE_03589 | Not Available | Negative | 3939261 - 3939737 | 17869.7 |
| response regulator receiver domain protein | BACPLE_03590 | Not Available | Negative | 3939835 - 3940482 | 24236.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

