Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase c-terminal domain protein | BACPLE_03541 | Not Available | Positive | 3891524 - 3897340 | 219860.0 |
| putative translation elongation factor g | BACPLE_03542 | Not Available | Positive | 3897998 - 3899923 | 72226.1 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_03543 | Not Available | Positive | 3899923 - 3902241 | 87108.3 |
| sigma-54 interaction domain protein | BACPLE_03544 | Not Available | Positive | 3902234 - 3903556 | 49691.2 |
| hypothetical protein | BACPLE_03545 | Not Available | Positive | 3903836 - 3904258 | 16091.5 |
| rtec protein | BACPLE_03546 | Not Available | Positive | 3904449 - 3905102 | 25177.7 |
| hypothetical protein | BACPLE_03547 | Not Available | Positive | 3905404 - 3906534 | 43083.9 |
| kap family p-loop domain protein | BACPLE_03548 | Not Available | Positive | 3906551 - 3909805 | 124234.0 |
| hypothetical protein | BACPLE_03549 | Not Available | Negative | 3909937 - 3911151 | 45730.0 |
| reverse transcriptase (rna-dependent dna polymerase) | BACPLE_03550 | Not Available | Negative | 3911156 - 3912808 | 64611.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

