Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reverse transcriptase (rna-dependent dna polymerase) | BACPLE_03531 | Not Available | Positive | 3883163 - 3884971 | 70461.2 |
| hypothetical protein | BACPLE_03532 | Not Available | Positive | 3885185 - 3885547 | 13614.5 |
| dna binding domain, excisionase family | BACPLE_03533 | Not Available | Negative | 3885625 - 3885930 | 11724.1 |
| hypothetical protein | BACPLE_03534 | Not Available | Negative | 3885962 - 3886261 | 11590.3 |
| hypothetical protein | BACPLE_03535 | Not Available | Negative | 3886267 - 3886446 | 6534.7 |
| dna binding domain, excisionase family | BACPLE_03536 | Not Available | Positive | 3886463 - 3886825 | 14059.1 |
| hypothetical protein | BACPLE_03537 | Not Available | Positive | 3886829 - 3887179 | 13925.0 |
| hypothetical protein | BACPLE_03538 | Not Available | Positive | 3887200 - 3888771 | 59804.1 |
| dna topoisomerase | BACPLE_03539 | Not Available | Positive | 3888832 - 3890919 | 77608.9 |
| hypothetical protein | BACPLE_03540 | Not Available | Positive | 3890992 - 3891534 | 20608.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

