Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein domain protein | BACPLE_00315 | Not Available | Negative | 354295 - 355182 | 31577.9 |
| antioxidant, ahpc/tsa family | BACPLE_00316 | Not Available | Negative | 355202 - 355780 | 21929.8 |
| transporter, small conductance mechanosensitive ion channel mscs family protein | BACPLE_00317 | Not Available | Positive | 355865 - 357079 | 45979.7 |
| thioesterase family protein | BACPLE_00318 | Not Available | Positive | 357086 - 357454 | 12896.5 |
| trka c-terminal domain protein | BACPLE_00319 | Not Available | Negative | 357739 - 359418 | 59778.9 |
| putative dna helicase | BACPLE_00320 | Not Available | Negative | 359415 - 361307 | 72673.6 |
| putative membrane protein | BACPLE_00321 | Not Available | Negative | 361300 - 362229 | 33590.1 |
| hypothetical protein | BACPLE_00322 | Not Available | Positive | 362348 - 363172 | 31165.6 |
| hypothetical protein | BACPLE_00323 | Not Available | Positive | 363187 - 364185 | 39339.5 |
| hypothetical protein | BACPLE_00324 | Not Available | Positive | 364229 - 365191 | 37812.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

