Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fibronectin type iii domain protein | BACPLE_03441 | Not Available | Positive | 3792846 - 3794669 | 66348.9 |
| pectinesterase | BACPLE_03442 | Not Available | Positive | 3794647 - 3796353 | 62866.4 |
| hypothetical protein | BACPLE_03443 | Not Available | Positive | 3796429 - 3798039 | 57800.1 |
| hypothetical protein | BACPLE_03444 | Not Available | Positive | 3798047 - 3799534 | 53855.0 |
| polygalacturonase (pectinase) | BACPLE_03445 | Not Available | Positive | 3799695 - 3801131 | 52377.2 |
| mannitol dehydrogenase domain protein | BACPLE_03446 | Not Available | Positive | 3801372 - 3802814 | 54328.6 |
| saf domain protein | BACPLE_03447 | Not Available | Positive | 3802818 - 3804347 | 55473.8 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_03448 | Not Available | Negative | 3804417 - 3808850 | 169439.0 |
| acetyl xylan esterase (axe1) | BACPLE_03449 | Not Available | Negative | 3808944 - 3810254 | 49780.6 |
| gdsl-like protein | BACPLE_03450 | Not Available | Negative | 3810272 - 3812020 | 65159.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

