Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ispg5, transposase orf1 | BACPLE_03431 | Not Available | Negative | 3777572 - 3777928 | 14000.8 |
| m protein repeat protein | BACPLE_03432 | Not Available | Negative | 3778025 - 3781681 | 143883.0 |
| hypothetical protein | BACPLE_03433 | Not Available | Negative | 3781665 - 3782255 | 23306.3 |
| hypothetical protein | BACPLE_03434 | Not Available | Negative | 3782282 - 3783517 | 48722.1 |
| radical sam domain protein | BACPLE_03435 | Not Available | Negative | 3783609 - 3785246 | 62494.3 |
| ribose-phosphate diphosphokinase | BACPLE_03437 | Not Available | Negative | 3785377 - 3786219 | 30850.3 |
| hypothetical protein | BACPLE_03436 | Not Available | Positive | 3786218 - 3786406 | 7268.89 |
| thiamine monophosphate synthase/teni | BACPLE_03438 | Not Available | Negative | 3786408 - 3787016 | 23051.7 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_03439 | Not Available | Positive | 3787604 - 3790861 | 118727.0 |
| susd family protein | BACPLE_03440 | Not Available | Positive | 3790862 - 3792826 | 73180.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

