Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03402 | Not Available | Negative | 3744269 - 3744463 | 7625.57 |
| hypothetical protein | BACPLE_03401 | Not Available | Positive | 3744462 - 3744641 | 7138.48 |
| hypothetical protein | BACPLE_03403 | Not Available | Positive | 3744680 - 3744916 | 9145.88 |
| 3-deoxy-d-manno-octulosonate cytidylyltransferase | BACPLE_03404 | Not Available | Positive | 3745073 - 3745834 | 28249.7 |
| peptidase m16 inactive domain protein | BACPLE_03405 | Not Available | Positive | 3745831 - 3747123 | 49222.0 |
| morn repeat protein | BACPLE_03406 | Not Available | Positive | 3747159 - 3748316 | 44000.5 |
| inositol monophosphatase family protein | BACPLE_03407 | Not Available | Positive | 3748316 - 3749098 | 29040.4 |
| tigr02453 family protein | BACPLE_03408 | Not Available | Positive | 3749172 - 3749837 | 25748.6 |
| yhch/yjgk/yial family protein | BACPLE_03409 | Not Available | Positive | 3749866 - 3750309 | 16412.9 |
| putative 1,4-alpha-glucan branching enzyme | BACPLE_03410 | Not Available | Positive | 3750328 - 3752340 | 77899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

