Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03391 | Not Available | Negative | 3736082 - 3736573 | 19504.8 |
| hypothetical protein | BACPLE_03392 | Not Available | Negative | 3736548 - 3736931 | 14676.5 |
| sigma-70 region 2 | BACPLE_03393 | Not Available | Negative | 3736977 - 3737528 | 21758.8 |
| hypothetical protein | BACPLE_03394 | Not Available | Negative | 3737608 - 3738030 | 15478.4 |
| hypothetical protein | BACPLE_03395 | Not Available | Positive | 3738043 - 3738486 | 15629.5 |
| succinate coa transferase | BACPLE_03396 | Not Available | Negative | 3738525 - 3740018 | 54296.8 |
| 4fe-4s binding domain protein | BACPLE_03397 | Not Available | Positive | 3740286 - 3741797 | 55045.4 |
| tat pathway signal sequence domain protein | BACPLE_03398 | Not Available | Positive | 3741831 - 3743204 | 52068.1 |
| hypothetical protein | BACPLE_03399 | Not Available | Positive | 3743204 - 3743650 | 16436.8 |
| hypothetical protein | BACPLE_03400 | Not Available | Positive | 3743660 - 3744160 | 18101.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

