Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | BACPLE_03331 | Not Available | Positive | 3665972 - 3667012 | 38020.3 |
| putative cobalamin-5-phosphate synthase | BACPLE_03332 | Not Available | Positive | 3667149 - 3667763 | 22669.5 |
| cobyric acid synthase cobq | BACPLE_03333 | Not Available | Positive | 3667783 - 3669801 | 74820.7 |
| putative threonine-phosphate decarboxylase | BACPLE_03334 | Not Available | Positive | 3669794 - 3670804 | 37726.0 |
| cobalamin biosynthesis protein cobd | BACPLE_03335 | Not Available | Positive | 3670786 - 3671727 | 34645.6 |
| hypothetical protein | BACPLE_03336 | Not Available | Negative | 3671880 - 3674162 | 85051.9 |
| hypothetical protein | BACPLE_03337 | Not Available | Negative | 3674203 - 3676419 | 81992.8 |
| hypothetical protein | BACPLE_03338 | Not Available | Negative | 3676446 - 3678299 | 70324.7 |
| hypothetical protein | BACPLE_03339 | Not Available | Negative | 3678431 - 3678553 | 5113.46 |
| arylsulfatase | BACPLE_03340 | Not Available | Negative | 3678600 - 3680312 | 64678.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

