Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03271 | Not Available | Negative | 3599646 - 3599825 | 7439.28 |
| hypothetical protein | BACPLE_03272 | Not Available | Negative | 3599869 - 3600273 | 14613.7 |
| rela/spot family protein | BACPLE_03273 | Not Available | Negative | 3600376 - 3602586 | 85044.9 |
| hypothetical protein | BACPLE_03274 | Not Available | Positive | 3602722 - 3604245 | 56844.9 |
| transcriptional regulator, arac family | BACPLE_03275 | Not Available | Negative | 3604329 - 3605246 | 35162.2 |
| efflux transporter, rnd family, mfp subunit | BACPLE_03276 | Not Available | Positive | 3605402 - 3606481 | 39077.3 |
| rnd transporter, hae1/hme family, permease protein | BACPLE_03277 | Not Available | Positive | 3606497 - 3609586 | 114877.0 |
| outer membrane efflux protein | BACPLE_03278 | Not Available | Positive | 3609623 - 3610912 | 47679.3 |
| hypothetical protein | BACPLE_03279 | Not Available | Negative | 3611230 - 3611352 | 4696.87 |
| hypothetical protein | BACPLE_03280 | Not Available | Positive | 3611435 - 3611713 | 9781.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

