Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | BACPLE_03261 | Not Available | Positive | 3588596 - 3590167 | 59844.5 |
| transcriptional regulator, blai/meci/copy family | BACPLE_03262 | Not Available | Positive | 3590435 - 3590809 | 14536.5 |
| peptidase, m56 family | BACPLE_03263 | Not Available | Positive | 3590940 - 3592454 | 58374.8 |
| hypothetical protein | BACPLE_03264 | Not Available | Positive | 3592504 - 3593556 | 40278.4 |
| mate efflux family protein | BACPLE_03266 | Not Available | Negative | 3593727 - 3595058 | 49636.0 |
| hypothetical protein | BACPLE_03265 | Not Available | Positive | 3595053 - 3595184 | 5098.34 |
| hypothetical protein | BACPLE_03267 | Not Available | Negative | 3595158 - 3595820 | 25106.1 |
| ribosomal protein s16 | BACPLE_03268 | Not Available | Negative | 3596072 - 3596614 | 19526.1 |
| hypothetical protein | BACPLE_03269 | Not Available | Negative | 3596720 - 3597568 | 31343.3 |
| oligopeptide transporter, opt family | BACPLE_03270 | Not Available | Negative | 3597588 - 3599576 | 70332.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

