Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03221 | Not Available | Positive | 3553483 - 3554019 | 20644.2 |
| integrase core domain protein | BACPLE_03222 | Not Available | Positive | 3554055 - 3554861 | 32012.8 |
| hypothetical protein | BACPLE_03223 | Not Available | Positive | 3555402 - 3555611 | 8005.49 |
| ferritin-like protein | BACPLE_03224 | Not Available | Positive | 3555773 - 3556225 | 17795.4 |
| membrane protein, marc family | BACPLE_03225 | Not Available | Positive | 3556250 - 3556975 | 27054.4 |
| ferritin | BACPLE_03226 | Not Available | Positive | 3557026 - 3557508 | 18275.6 |
| deoxyribose-phosphate aldolase | BACPLE_03227 | Not Available | Positive | 3557537 - 3558586 | 38096.7 |
| phosphoglycerate mutase 1 family | BACPLE_03228 | Not Available | Positive | 3558600 - 3559349 | 28421.1 |
| hsp20/alpha crystallin family protein | BACPLE_03229 | Not Available | Positive | 3559417 - 3559845 | 16428.6 |
| sigma-70 region 2 | BACPLE_03230 | Not Available | Positive | 3559931 - 3560386 | 17822.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

