Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| istb-like atp-binding protein | BACPLE_03211 | Not Available | Negative | 3547726 - 3548508 | 29303.8 |
| integrase core domain protein | BACPLE_03213 | Not Available | Negative | 3548495 - 3550075 | 60295.9 |
| hypothetical protein | BACPLE_03212 | Not Available | Positive | 3550046 - 3550195 | 5420.71 |
| hypothetical protein | BACPLE_03214 | Not Available | Positive | 3550268 - 3550891 | 23671.4 |
| hypothetical protein | BACPLE_03215 | Not Available | Positive | 3550934 - 3551473 | 19913.2 |
| hypothetical protein | BACPLE_03216 | Not Available | Negative | 3551559 - 3551789 | 8991.06 |
| hypothetical protein | BACPLE_03217 | Not Available | Negative | 3551771 - 3552001 | 8693.62 |
| integrase family protein | BACPLE_03218 | Not Available | Negative | 3551992 - 3552417 | 16147.3 |
| integrase | BACPLE_03219 | Not Available | Negative | 3552442 - 3552564 | 4621.7 |
| hypothetical protein | BACPLE_03220 | Not Available | Positive | 3553129 - 3553263 | 5495.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

