Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03201 | Not Available | Positive | 3538299 - 3539555 | 47213.0 |
| hypothetical protein | BACPLE_03202 | Not Available | Positive | 3539581 - 3540594 | 37321.9 |
| hypothetical protein | BACPLE_03204 | Not Available | Negative | 3541198 - 3541482 | 10662.0 |
| hypothetical protein | BACPLE_03203 | Not Available | Positive | 3541459 - 3541632 | 7105.9 |
| rna polymerase sigma-70 factor | BACPLE_03205 | Not Available | Positive | 3541693 - 3542208 | 20152.7 |
| sigma factor regulatory protein, fecr/pupr family | BACPLE_03206 | Not Available | Positive | 3542280 - 3543083 | 30531.9 |
| tonb-dependent receptor plug domain protein | BACPLE_03207 | Not Available | Positive | 3543080 - 3545347 | 86037.4 |
| hypothetical protein | BACPLE_03208 | Not Available | Positive | 3545350 - 3545913 | 20955.4 |
| tat pathway signal sequence domain protein | BACPLE_03209 | Not Available | Positive | 3546040 - 3547212 | 43599.7 |
| hypothetical protein | BACPLE_03210 | Not Available | Positive | 3547220 - 3547690 | 17462.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

