Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 1 | BACPLE_00284 | Not Available | Positive | 321248 - 323317 | 79536.3 |
| ppx/gppa phosphatase family protein | BACPLE_00285 | Not Available | Positive | 323333 - 324319 | 37242.4 |
| hypothetical protein | BACPLE_00286 | Not Available | Negative | 324407 - 324919 | 19645.8 |
| dna mismatch repair protein muts | BACPLE_00287 | Not Available | Positive | 325090 - 327711 | 98446.9 |
| radical sam domain protein | BACPLE_00288 | Not Available | Positive | 327724 - 328503 | 29249.2 |
| hypothetical protein | BACPLE_00289 | Not Available | Negative | 328573 - 329970 | 51289.0 |
| hypothetical protein | BACPLE_00290 | Not Available | Positive | 330338 - 330640 | 10918.0 |
| Trna-asp | Not Available | Not Available | Positive | 330751 - 330827 | Not Available |
| quinolinate synthetase complex, a subunit | BACPLE_00292 | Not Available | Negative | 331444 - 332436 | 36742.5 |
| rna methyltransferase, trmh family | BACPLE_00293 | Not Available | Positive | 332768 - 333433 | 25269.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

