Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, m23 family | BACPLE_03161 | Not Available | Negative | 3485664 - 3486521 | 31889.2 |
| alanine--trna ligase | BACPLE_03162 | Not Available | Positive | 3486763 - 3489381 | 97107.1 |
| mate efflux family protein | BACPLE_03163 | Not Available | Positive | 3489503 - 3490870 | 49749.1 |
| transcriptional regulator, arac family | BACPLE_03164 | Not Available | Negative | 3490883 - 3491791 | 35454.0 |
| hypothetical protein | BACPLE_03165 | Not Available | Positive | 3491949 - 3493205 | 48060.6 |
| hypothetical protein | BACPLE_03166 | Not Available | Positive | 3493234 - 3494124 | 32977.4 |
| abc transporter, atp-binding protein | BACPLE_03167 | Not Available | Positive | 3494139 - 3495629 | 56206.7 |
| abc-2 type transporter | BACPLE_03168 | Not Available | Positive | 3495626 - 3496747 | 41885.9 |
| abc-2 type transporter | BACPLE_03169 | Not Available | Positive | 3496760 - 3497821 | 39803.8 |
| dna gyrase/topoisomerase iv, a subunit | BACPLE_03170 | Not Available | Positive | 3498060 - 3500705 | 101059.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

