Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine 5'-phosphate decarboxylase | BACPLE_03141 | Not Available | Positive | 3464579 - 3465403 | 30979.3 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | BACPLE_03142 | Not Available | Positive | 3465674 - 3466714 | 37335.1 |
| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz | BACPLE_03143 | Not Available | Positive | 3466719 - 3468104 | 51539.6 |
| acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase | BACPLE_03144 | Not Available | Positive | 3468106 - 3468873 | 27802.7 |
| hypothetical protein | BACPLE_03145 | Not Available | Positive | 3468919 - 3469476 | 21570.5 |
| trna dimethylallyltransferase | BACPLE_03146 | Not Available | Positive | 3469587 - 3470498 | 35426.9 |
| putative atp synthase f0, a subunit | BACPLE_03147 | Not Available | Negative | 3470485 - 3471501 | 37775.7 |
| hypothetical protein | BACPLE_03148 | Not Available | Negative | 3471526 - 3471867 | 12902.5 |
| septum formation initiator | BACPLE_03149 | Not Available | Negative | 3471867 - 3472169 | 12038.6 |
| dna polymerase iii, subunit gamma and tau | BACPLE_03150 | Not Available | Positive | 3472224 - 3474125 | 71515.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

