Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose 1-epimerase | BACPLE_03131 | Not Available | Negative | 3452054 - 3452407 | 13818.6 |
| gdsl-like protein | BACPLE_03132 | Not Available | Negative | 3452380 - 3454026 | 61813.4 |
| putative rhamnogalacturonan acetylesterase rhgt | BACPLE_03133 | Not Available | Negative | 3454242 - 3455525 | 48671.5 |
| polygalacturonase (pectinase) | BACPLE_03134 | Not Available | Positive | 3455751 - 3457136 | 52565.7 |
| hypothetical protein | BACPLE_03135 | Not Available | Negative | 3457201 - 3458442 | 46006.6 |
| carbon starvation protein csta | BACPLE_03136 | Not Available | Negative | 3458510 - 3459940 | 52356.6 |
| hypothetical protein | BACPLE_03137 | Not Available | Positive | 3460118 - 3461776 | 62947.7 |
| hypothetical protein | BACPLE_03138 | Not Available | Positive | 3461793 - 3463028 | 45240.4 |
| hypothetical protein | BACPLE_03139 | Not Available | Positive | 3463042 - 3463353 | 11760.0 |
| peptide chain release factor 1 | BACPLE_03140 | Not Available | Positive | 3463399 - 3464508 | 41627.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

