Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter, permease protein | BACPLE_03121 | Not Available | Positive | 3439016 - 3440266 | 46119.2 |
| efflux abc transporter, permease protein | BACPLE_03122 | Not Available | Positive | 3440269 - 3441513 | 45959.2 |
| efflux transporter, rnd family, mfp subunit | BACPLE_03123 | Not Available | Positive | 3441545 - 3442642 | 40134.2 |
| outer membrane efflux protein | BACPLE_03124 | Not Available | Positive | 3442646 - 3443980 | 50163.3 |
| nol1/nop2/sun family protein | BACPLE_03125 | Not Available | Negative | 3444170 - 3445582 | 52352.6 |
| thymidylate synthase | BACPLE_03126 | Not Available | Positive | 3445657 - 3446451 | 30609.6 |
| dihydrofolate reductase | BACPLE_03127 | Not Available | Positive | 3446469 - 3446963 | 18820.3 |
| transcriptional regulator, asnc family | BACPLE_03128 | Not Available | Negative | 3446975 - 3447454 | 18141.0 |
| response regulator receiver domain protein | BACPLE_03129 | Not Available | Negative | 3447645 - 3451826 | 158241.0 |
| hypothetical protein | BACPLE_03130 | Not Available | Negative | 3451897 - 3452019 | 5001.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

