Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impb/mucb/samb family protein | BACPLE_03101 | Not Available | Positive | 3414794 - 3415900 | 41860.6 |
| atp-binding protein, mrp/nbp35 family | BACPLE_03102 | Not Available | Negative | 3416152 - 3417249 | 39414.8 |
| putative trna (guanine-n(7)-)-methyltransferase | BACPLE_03103 | Not Available | Negative | 3417269 - 3418027 | 29580.1 |
| hypothetical protein | BACPLE_03104 | Not Available | Positive | 3418161 - 3419900 | 64200.0 |
| hypothetical protein | BACPLE_03105 | Not Available | Positive | 3419970 - 3420839 | 33264.1 |
| peptidase, s41 family | BACPLE_03106 | Not Available | Positive | 3420896 - 3422266 | 51015.4 |
| outer membrane efflux protein | BACPLE_03107 | Not Available | Positive | 3422365 - 3423897 | 55984.9 |
| auxiliary transport protein, membrane fusion protein (mfp) family protein | BACPLE_03108 | Not Available | Positive | 3423907 - 3424890 | 35876.1 |
| abc-2 type transporter | BACPLE_03109 | Not Available | Positive | 3424933 - 3426072 | 42587.8 |
| hypothetical protein | BACPLE_03110 | Not Available | Positive | 3426085 - 3427341 | 47275.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

