Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s6 | BACPLE_03081 | Not Available | Negative | 3393299 - 3393646 | 13588.4 |
| transcriptional regulator, marr family | BACPLE_03082 | Not Available | Positive | 3393852 - 3394298 | 17430.3 |
| hypothetical protein | BACPLE_03083 | Not Available | Positive | 3394489 - 3394665 | 6063.79 |
| transcriptional regulatory protein rpry | BACPLE_03084 | Not Available | Negative | 3394740 - 3395438 | 26812.5 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_03085 | Not Available | Negative | 3395442 - 3396992 | 59604.3 |
| translation elongation factor g | BACPLE_03086 | Not Available | Negative | 3397258 - 3399417 | 80796.7 |
| putative oxygen-independent coproporphyrinogen iii oxidase | BACPLE_03087 | Not Available | Positive | 3399636 - 3400769 | 43673.7 |
| phosphoglucosamine mutase | BACPLE_03088 | Not Available | Negative | 3401127 - 3402515 | 50491.6 |
| hypothetical protein | BACPLE_03089 | Not Available | Negative | 3402541 - 3403221 | 25220.9 |
| dhh family protein | BACPLE_03090 | Not Available | Negative | 3403315 - 3404352 | 39110.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

