Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family protein | BACPLE_03071 | Not Available | Positive | 3386567 - 3387103 | 19991.1 |
| hypothetical protein | BACPLE_03072 | Not Available | Positive | 3387103 - 3387438 | 12272.7 |
| nadp oxidoreductase coenzyme f420-dependent | BACPLE_03073 | Not Available | Positive | 3387435 - 3388232 | 30035.9 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, yrbi family | BACPLE_03074 | Not Available | Positive | 3388251 - 3388769 | 19033.1 |
| septum formation protein maf | BACPLE_03075 | Not Available | Positive | 3388779 - 3389375 | 22761.5 |
| glycosyltransferase, group 2 family protein | BACPLE_03076 | Not Available | Negative | 3389372 - 3390394 | 39155.0 |
| trna methylthiotransferase yqev | BACPLE_03077 | Not Available | Negative | 3390391 - 3391707 | 48992.8 |
| hypothetical protein | BACPLE_03078 | Not Available | Positive | 3392011 - 3392211 | 6496.55 |
| ribosomal protein l9 | BACPLE_03079 | Not Available | Negative | 3392559 - 3393008 | 16203.9 |
| ribosomal protein s18 | BACPLE_03080 | Not Available | Negative | 3393027 - 3393296 | 10561.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

