Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03061 | Not Available | Positive | 3372945 - 3373823 | 33332.7 |
| hypothetical protein | BACPLE_03062 | Not Available | Positive | 3373842 - 3375317 | 56948.7 |
| hypothetical protein | BACPLE_03063 | Not Available | Positive | 3375340 - 3377448 | 79471.8 |
| caspase domain protein | BACPLE_03064 | Not Available | Positive | 3377533 - 3380325 | 104462.0 |
| sodium ion-translocating decarboxylase, beta subunit | BACPLE_03065 | Not Available | Negative | 3380781 - 3381941 | 40907.3 |
| biotin-requiring enzyme | BACPLE_03066 | Not Available | Negative | 3381944 - 3382372 | 15265.7 |
| sodium pump decarboxylase, gamma subunit | BACPLE_03067 | Not Available | Negative | 3382395 - 3383330 | 34652.5 |
| carboxyl transferase domain protein | BACPLE_03068 | Not Available | Negative | 3383350 - 3384903 | 56425.9 |
| methylmalonyl-coa epimerase | BACPLE_03069 | Not Available | Negative | 3384953 - 3385357 | 14526.6 |
| hypothetical protein | BACPLE_03070 | Not Available | Negative | 3385523 - 3386491 | 37966.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

