Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | BACPLE_03041 | Not Available | Negative | 3349757 - 3350494 | 27500.6 |
| efflux abc transporter, permease protein | BACPLE_03042 | Not Available | Negative | 3350487 - 3351782 | 49220.9 |
| efflux abc transporter, permease protein | BACPLE_03043 | Not Available | Negative | 3351804 - 3353123 | 49969.8 |
| efflux transporter, rnd family, mfp subunit | BACPLE_03044 | Not Available | Negative | 3353208 - 3354458 | 47224.7 |
| putative dna modification/repair radical sam protein | BACPLE_03045 | Not Available | Positive | 3354673 - 3355962 | 49162.3 |
| linear amide c-n hydrolase, choloylglycine hydrolase family protein | BACPLE_03046 | Not Available | Negative | 3355999 - 3357084 | 40015.7 |
| putative dna metabolism protein | BACPLE_03047 | Not Available | Positive | 3357200 - 3357967 | 30653.7 |
| trna pseudouridine synthase a | BACPLE_03048 | Not Available | Negative | 3357964 - 3358722 | 29240.8 |
| hypothetical protein | BACPLE_03049 | Not Available | Negative | 3358736 - 3359440 | 26361.1 |
| hypothetical protein | BACPLE_03050 | Not Available | Positive | 3359597 - 3360673 | 38145.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

