Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 2 family protein | BACPLE_03031 | Not Available | Positive | 3340436 - 3341389 | 36577.2 |
| hypothetical protein | BACPLE_03032 | Not Available | Positive | 3341389 - 3341889 | 18913.6 |
| hypothetical protein | BACPLE_03033 | Not Available | Positive | 3341897 - 3342583 | 25349.3 |
| hypothetical protein | BACPLE_03034 | Not Available | Positive | 3342589 - 3343161 | 21032.4 |
| apbe family protein | BACPLE_03035 | Not Available | Positive | 3343166 - 3344179 | 37863.3 |
| hypothetical protein | BACPLE_03036 | Not Available | Positive | 3344188 - 3344322 | 5123.98 |
| putative membrane protein | BACPLE_03037 | Not Available | Negative | 3344434 - 3345339 | 34247.1 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_03038 | Not Available | Negative | 3345442 - 3346788 | 50969.4 |
| sigma-54 interaction domain protein | BACPLE_03039 | Not Available | Negative | 3346801 - 3348159 | 50432.9 |
| outer membrane efflux protein | BACPLE_03040 | Not Available | Negative | 3348200 - 3349687 | 57135.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

