Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | BACPLE_03021 | Not Available | Negative | 3330930 - 3331943 | 37548.4 |
| iron chelate uptake abc transporter, fect family, permease protein | BACPLE_03022 | Not Available | Negative | 3331943 - 3332983 | 36305.8 |
| periplasmic binding protein | BACPLE_03023 | Not Available | Negative | 3332980 - 3334116 | 42613.1 |
| olfactomedin-like domain protein | BACPLE_03024 | Not Available | Negative | 3334122 - 3335201 | 39675.0 |
| tonb-dependent receptor | BACPLE_03025 | Not Available | Negative | 3335250 - 3337289 | 77324.5 |
| putative amidophosphoribosyltransferase | BACPLE_03026 | Not Available | Negative | 3337691 - 3339097 | 52136.0 |
| Trna-thr | Not Available | Not Available | Positive | 3339418 - 3339491 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 3339509 - 3339585 | Not Available |
| hypothetical protein | BACPLE_03029 | Not Available | Negative | 3339680 - 3339868 | 7606.74 |
| hypothetical protein | BACPLE_03030 | Not Available | Positive | 3339886 - 3340416 | 20504.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

