Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_03001 | Not Available | Negative | 3303909 - 3304268 | 13310.3 |
| 5'-nucleotidase, c-terminal domain protein | BACPLE_03002 | Not Available | Negative | 3304289 - 3306043 | 66093.2 |
| hypothetical protein | BACPLE_03003 | Not Available | Negative | 3306033 - 3306203 | 6415.99 |
| tex-like protein n-terminal domain protein | BACPLE_03004 | Not Available | Positive | 3306203 - 3308341 | 80194.5 |
| hydrolase, nudix family | BACPLE_03005 | Not Available | Positive | 3308356 - 3309153 | 29759.8 |
| transglycosylase | BACPLE_03006 | Not Available | Positive | 3309132 - 3311552 | 91608.0 |
| hypothetical protein | BACPLE_03007 | Not Available | Positive | 3311724 - 3312692 | 38688.7 |
| d-ala-d-ala dipeptidase | BACPLE_03008 | Not Available | Positive | 3312711 - 3313397 | 25924.1 |
| putative peptidase t | BACPLE_03009 | Not Available | Positive | 3313443 - 3315068 | 59747.4 |
| hypothetical protein | BACPLE_03010 | Not Available | Positive | 3315350 - 3316009 | 24929.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

